Pathology of Oropharyngeal Squamous Cell Carcinoma (OPSCC)

  • Two Distinct Disease Entities:
    • OPSCC is now classified as two biologically and prognostically distinct diseases:
      • Based on high-risk HPV status: 
        • HPV-associated (p16-positive) and HPV-independent (p16-negative) carcinoma:
          • A division formalized in the WHO classification and the AJCC 8th edition staging system
    • HPV-associated tumors:
      • Carry a markedly better prognosis:
        • With 8-year overall survival of 70.9% versus 30.2% for HPV-negative disease in RTOG 0129:
          • HR 0.30; 95% CI 0.21–0.42
  • Histopathology:
    • HPV-Associated (
    • ) OPSCC:
      • These tumors arise from the specialized reticulated epithelium lining the tonsillar crypts rather than the surface mucosa
      • Characteristic features include:
        • Nonkeratinizing growth:
          • Lobules and sheets of immature basaloid cells with high nuclear-to-cytoplasmic ratios and hyperchromatic nuclei; absent or minimal keratinization
        • Basaloid cytology:
          • Resembling deep crypt epithelium, with lobular / endophytic growth and smooth pushing borders
        • Permeating tumor-infiltrating lymphocytes:
          • Within and around tumor nests
        • Absence of surface dysplasia:
          • Dysplasia is confined to crypts
        • Cystic nodal metastases:
          • Which can mimic branchial cleft cysts
      • In a 4-year prospective study of 435 OPSCCs:
        • Strictly defined nonkeratinizing morphology had a 99.1% positive predictive value for p16 positivity and 100% PPV for HR-HPV mRNA positivity
        • A “nonkeratinizing with maturation” (hybrid) intermediate pattern is p16-positive in ~92% of cases
    • HPV-Independent (Keratinizing) OPSCC:
      • These resemble conventional keratinizing SCC of the upper aerodigestive tract:
        • With keratin pearl formation
        • Individual cell keratinization
        • Intercellular bridges
        • Progressive squamous maturation
        • Origin from dysplastic surface epithelium
      • Molecularly they are characterized by high rates of:
        • TP53 mutation
        • CCND1 (cyclin D1) copy-number gains
        • 9p21 / CDKN2A loss
  • A Note on Grading:
    • Although HPV-associated tumors appear “poorly differentiated” by conventional criteria:
      • They paradoxically carry the best prognosis:
        • Westra has argued they may be best viewed as well-differentiated given their resemblance to native crypt epithelium
    • Both the 2018 CAP guideline and its 2025 update recommend against providing traditional grade / differentiation status for HPV-associated OPSCC:
      • Instead recommend reporting the WHO histologic subtype
    • Conventional grading (G1 to G4) still applies to HPV-independent OPSCC
    • Certain morphologic features retain prognostic value even within p16-positive disease:
      • Tumor cell anaplasia (nuclei ≥ 5 lymphocyte diameters) and multinucleation:
        • Independently predicted worse disease-specific survival (HR 9.9 and 11.9, respectively), and “non-classic” HPV-positive morphology was associated with poorer 5-year survival (58.4% vs 83.9%)
      • Keratinization:
        • Independently predicts worse survival
The 2025 CAP update enumerates the recognized morphologic subtypes.
  • Histologic Variants:
    • Basaloid SCC:
      • Is a mixed entity resolvable by HPV status:
        • HPV-positive:
          • Younger patients
          • p16+ / p53−
          • Prognosis – favorable
        • HPV-negative:
          • Older patients
          • Tobacco / alcohol-related
          • p53 overexpression
          • Biology – aggressive
    • Lymphoepithelial-like carcinoma:
      • Requires mandatory dual HPV and EBV testing:
        • As it closely mimics metastatic nasopharyngeal carcinoma
  • HPV / p16 Testing:
    • Who to Test:
      • All patients with newly diagnosed OPSCC should undergo HR-HPV testing, regardless of histologic subtype:
        • A strong CAP recommendation, endorsed by ASCO and listed as required in NCCN workup
      • Testing may be performed on the:
        • Primary tumor, a nodal metastasis, or FNA of a cervical node
      • Routine testing is not recommended for:
        • Nonsquamous oropharyngeal or non-oropharyngeal head and neck carcinomas (except sinonasal)
      • p16 IHC — the First-Line Test:
        • p16 immunohistochemistry is the recommended primary test:
          • Positivity requires:
            •  ≥ 70% nuclear AND cytoplasmic expression with at least moderate-to-strong intensity:
              • Typically in a confluent / block-like pattern
        • The E6H4 clone is most widely used and validated
        • With these criteria:
          • Sensitivity for transcriptionally active HR-HPV approaches 100% with specificity of ~ 85% to 95% in the oropharynx
        • Cases with 50% to 70% staining are equivocal and warrant HPV-specific testing
        • p16 and HPV may be used interchangeably only within the oropharynx
      • HPV-Specific (Direct) Testing:
        • The 2025 CAP update expanded indications for confirmatory HPV-specific testing beyond p16 IHC:
  • HPV-specific testing should be performed in:
    • Low-prevalence geographic regions
    • Equivocal p16 staining
    • Discrepancy between p16 and morphology (e.g., p16+ but keratinizing)
    • Large multisite tumors
    • Non-tonsillar / non-base-of-tongue subsites
    • Clinical trials
    • SCC of unknown primary
  • Discordant Results:
    • p16+ / HPV− discordance occurs in ~ 4% to 20% of cases:
      • In the multinational HNCIG-EPIC-OPC analysis (n=7,654):
        • Discordant patients had intermediate prognosis:
          • Significantly worse than double-positive and better than double-negative: 

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