Thyroid Cancer Pathology ATA 2025 Thyroid Cancer Guidelines Part 1

  • Throughout the American Thyroid Association (ATA) 2025 Thyroid Cancer Guidelines:
    • The 5th edition of the WHO Classification of Thyroid Tumors has been utilized for descriptions of the types of non-anaplastic follicular cell-derived thyroid carcinomas and NIFTP
  • Approximately 90% of thyroid cancer cases are well differentiated and are classified based on the predominant histomorphology:
    • However, they now also can be categorized based on their molecular profiles
  • Four main types of DTC include:
    • Follicular thyroid carcinoma (FTC)
    • Invasive encapsulated follicular variant of papillary thyroid carcinoma (IEFVPTC)
    • Papillary thyroid carcinoma (PTC)
    • Oncocytic thyroid carcinoma (OTC)
  • PTC is the most common type of DTC:
    • PTC is typically indolent and associated with excellent long-term survival:
      • 96% at 5 years
      • 93% at 10 years
      • Greater than 90% at 20 years
    • Overall, mortality rates for PTC are:
      • 1% to 6.5%
    • Overall recurrence rate of 15% to 35%:
      • Tumor recurrence typically occurs in the:
        • Tumor bed
        • Cervical lymph nodes
        • Distant sites (rarely)
    • PTCs have characteristic nuclear features:
      • Core elements fall into three buckets (per WHO 5th ed. framework and modern scoring systems):
        • Size / shape/ crowding:
          • Nuclear enlargement
          • Elongation / ovality
          • Overlapping / crowding
          • Pseudostratification at the papillary edges
            • These are low-power cues to look closer
        • Membrane irregularities:
          • Nuclear grooves (longitudinal folds)
          • Intranuclear cytoplasmic pseudoinclusions (INCIs):
            • Round, sharply circumscribed, eosinophilic inclusions:
              • Caused by cytoplasmic invagination
          • Irregular nuclear contours / notches
          • Notes for practice:
            • Grooves are sensitive but not specific
            • INCIs are more specific for PTC when true (focus and multiple planes help)
        • Chromatin changes:
          • Chromatin clearing with peripheral margination:
            • The classic “Orphan Annie-eye” look
          • Fine (“powdery”) chromatin with micronucleoli
          • Apparent thickened nuclear membrane on H&E
          • Clearing can be mimicked by Hashimoto thyroiditis or fixation artifact:
            • So it needs to be interpreted with the full nuclear constellation
      • How pathologists operationalize this:
        • In follicular-patterned lesions (e.g., NIFTP vs infiltrative FV-PTC), a 3-category nuclear score is applied:
          • Size / shape
          • Membrane irregularities
          • Chromatin features
        • A score ≥ 2 supports PTC-type nuclear features
        • NIFTP requires papillary-type nuclei (score ≥ 2) and strict architectura l/ invasion criteria
      • WHO 2022 emphasizes first deciding whether PTC-type nuclei are present before subtyping;
        • This step drives nomenclature:
          • Low-risk neoplasm vs malignancy
      • Molecular correlations you’ll see in reports:
        • BRAF V600E–driven tumors (classic / tall-cell subtypes):
          • Tend to show florid nuclear features:
            • Grooves (longitudinal folds)
            • INCIs
            • Glassy nuclei
        • RAS-mutated follicular-patterned tumors:
          • Often have subtler nuclei
      • Papillary thyroid carcinomas (PTC) can present as:
        • Infiltrative and encapsulated tumors
      • Molecular studies have shown that most PTCs (90%) develop by:
        • The activation of a Mitogen-Activated Protein Kinase (MAPK) pathway-event:
          • This activation occurs via mutually exclusive mutations in:
            •  BRAF or RAS oncogenes
        • A subset of PTCs is acquired by gene fusions involving:
          • Rearranged during transfection (RET) or (less commonly) other receptor tyrosine kinases
        • Oncogenic mutations at BRAFV600E:
          • Are the most common in PTC
        • A minority can show non-V600E mutations:
          • Such as BRAFK601E or BRAF fusions
        • The IEFVPTC is an encapsulated and invasive follicular-patterned tumor:
          • Based on its tendency for vascular invasion, distant metastasis, and molecular profile:
            • It can behave similarly to FTC
  • Histologically, FTCs are encapsulated follicular patterned tumors:
    • Without the nuclear features of PTC
    • They are characterized by the presence of:
      • Vascular:
        • Limited or extensive
      • Capsular invasion:
        • Vascular invasion involving vessels within the tumor capsule
      • Widely invasive:
        • Extensive invasion of the thyroid parenchyma beyond the tumor capsule
    • These tumors are mostly driven by activating mutations in:
      • RAS oncogenes (NRAS > HRAS > KRAS), PAX8::PPARγ fusions, EIF1AX mutations, PIK3CA mutations, or loss of PTEN expression:
        • BRAFV600E and RET fusions typically are not seen in FTC
      • Expression of PAX8::PPARγ fusions oncoprotein:
        • Occur in 25% of FTC:
          • In which the thyroid transcription factor PAX8 drives the expression of PPARγ:
            • A receptor involved in adipocyte biology
      • Mutations in DICER1:
        • Which encodes a ribonuclease in the processing of microRNA precursors:
          • Occur in RAS-like thyroid neoplasms and are prevalent in FTC
        • DICER1 mutations can also be seen in subsets of PTC, differentiated high-grade thyroid carcinoma (DHGTC), poorly differentiated thyroid carcinoma (PDTC), and anaplastic thyroid carcinoma (ATC)
  • With greater recognition of the unique genomic features of OTC (previously known as Hürthle cell carcinoma) and different clinical behavior from classical forms of FTC:
    • These tumors are now considered a third form of DTC:
      • Rather than a subtype of FTC in the current WHO classification:
        • They account for ∼ 3% of all DTC
    • An “oncocyte” is an enlarged polygonal cell with an abundant granular eosinophilic cytoplasm, round nuclei with even chromatin pattern, and prominent nucleoli:
      • As defined by WHO:
        • Oncocytic neoplasms are usually encapsulated and composed of ≥ 75% oncocytic cells
      • Oncocytic features can be identified in some PTC or FTC cells at lower frequencies
    • Most of these tumors are larger in size; however, smaller tumors can be identified
    • Like FTC, the presence of invasive characteristics:
      • Tumor capsule and / or vascular invasion:
        • In an encapsulated oncocytic neoplasm:
          • Is diagnostic of OTC
      • OTCs can be classified as:
        • Minimally invasive
        • Encapsulated angio-invasive
        • Widely invasive
    • Genomically, OTCs are characterized typically by:
      • A near-haploid genome
      • Mitochondrial DNA mutations:
        • Commonly involving genes encoding Complex 1 of the mitochondrial respiratory chain
      • Mutations in DAXX and ATRX:
        • Involved in telomere length
      • OTCs can also have mutations that activate:
        • Mammalian target of rapamycin (mTOR) and MAPK signaling
      • Like PTC and FTC:
        • More aggressive OTCs can have mutations in the:
          • TERTpromoter or TP53
      • Clinically, some studies have shown that OTCs have a greater tendency toward lymph node metastases while retaining a predilection for distant metastases, and unlike FTC:
        • OTCs often are not radioiodine-avid despite retaining other differentiated features:
          • Such as Tg secretion and TSH receptor expression
  • The 5th edition of the WHO Classification of Thyroid Tumors:
    • Also introduces a new category of high-grade follicular cell derived, non-anaplastic carcinoma that includes:
      • PDTC and DHGTC.
    • By molecular analysis, poorly differentiated thyroid cancer and DHGTC:
      • Harbor driver mutations in BRAF (BRAFV600E) and RAS genes:
        • In some cases may show gene fusions:
          • Often RET and NTRK3
      • Additional mutations in the:
        • TERT promoter, PIK3CA, and TP53 are commonly identified
    • DHGTC has been defined by certain authors as a:
      • “Thyroid malignancy” that is recognized as DTC but in which certain histological and cytopathologic features are present that justify the lesion being classified as “high-grade”
      • The DHGTCs are invasive, high-grade carcinomas:
        • That show one of the following two histological features:
          • Mitotic count ≥ 5 per 2 mm2
          • Tumor necrosis
    • By contrast, thyroid carcinomas classified as PDTC are follicular cell-derived tumors that show a minor component of DTC (papillary, follicular, oncocytic):
      • Show solid and / or insular growth pattern with presence of either:
        • Necrosis or ≥ mitotic count of 3 per 2 mm2, and lack the usual histological characteristics and aggressiveness of ATC
    • In both cases, clinical behavior is considered:
      • Intermediate between DTC and ATC

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