Transcriptomic Classification of Thyroid Cancer

  • The trans-genomic classification of thyroid cancer, particularly papillary thyroid carcinoma (PTC):
    • Has significant clinical implications, as it enables personalized diagnosis, prognosis, and treatment strategies
  • Recent studies have identified molecular subtypes of PTC based on genomic and transcriptomic profiling:
    • Which provide insights into tumor behavior and therapeutic responses
  • Key Molecular Subtypes
    • Immune-Enriched Subtype (Subtype 2):
      • High immune infiltration and overexpression of immune checkpoints
      • Potential candidates for immunotherapy.
    • BRAF-Enriched Subtype (Subtype 4):
      • Associated with aggressive features like:
        • Extrathyroidal extension
        • Advanced TNM stages
    • Enriched in MAPK and PI3K / AKT signaling pathways:
      • Suggesting targeted therapy options
    • Stromal Subtype (Subtype 3):
      • High stromal content with distinct microenvironmental features
    • CNV-Enriched Subtype (Subtype 6):
      • Characterized by copy number variations with unique genetic drivers
  • Clinical Implications:
    • Prognostic Value:
      • Molecular subtypes correlate with survival outcomes
      • Type 3 subtypes (high-risk):
        • Show poorer progression-free survival compared to Type 1 (low-risk)
    • Therapeutic Guidance:
      • Subtypes like the Immune-Enriched or Ras-like Type 1:
        • May benefit from immunotherapy or radioactive iodine (RAI) therapy, respectively
      • BRAF-mutant subtypes:
        • May require targeted tyrosine kinase inhibitors due to RAI resistance
    • Preoperative Decision-Making:
      • Genomic classifiers applied to fine needle aspirates can help stratify patients for active surveillance or surgery
    • Tailored Treatments:
      • Understanding subtype-specific pathways enables the development of novel therapies, such as EZH2 inhibitors for aggressive subtypes
  • This classification system bridges the gap between molecular biology and clinical practice, paving the way for precision medicine in thyroid cancer management

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